Fusion Detection Results

{% set figure_idx = metadata.genes_of_interest|length + 1 %} {% set table_idx = metadata.genes_of_interest|num_tids + 14 %}
{% if results.fusion.intersected %}
Figure {{ figure_idx }} | Intersected fusion candidates
Figure {{ figure_idx + 1}} | STAR-Fusion (left) and FusionCatcher (right) fusion candidates

Table {{ table_idx }} | Top 20 intersected fusion candidates

{% for item in results.fusion.tables.intersection.top20 %} {% endfor %}
Fusion name Fusion type Junction reads count Spanning fragments count
{{ item.name }} {{ item.type }} {{ item.jr_count }} {{ item.sf_count }}
{% else %}
Figure {{ figure_idx }} | STAR-Fusion fusion candidates

Table {{ table_idx }} | Top 20 STAR-Fusion fusion candidates

{% for item in results.fusion.tables['star-fusion'].top20 %} {% endfor %}
Fusion name Fusion type Junction reads count Spanning fragments count
{{ item.name }} {{ item.type }} {{ item.jr_count }} {{ item.sf_count }}
{% endif %}