Table 9 | High-impact variants in genes of interest

{% for gene in results.var.overview %} {% set outer_loop = loop %} {% for item in results.var.overview[gene] %} {% if loop.index == 1 %} {{ gene }} {% endif %} {{ item.HGVSc }} {{ item.HGVSp }} {{ item.Existing_variation.split(",")|join(", ") }} {{ item.FREQ }} {{ item.is_in_hotspot }} {{ item.PVAL }} {% endfor %} {% endfor %}

Gene	HGVS description	Known database identifiers	Allele frequency	Hotspot	P-value

Table 10 | Top 5 detected fusion genes by supporting reads

{% for item in results.fusion.tables.intersection.top20[:5] %} {% endfor %}

Fusion name	Fusion type	Junction reads count	Spanning fragments count
{{ item.name }}	{{ item.type }}	{{ item.jr_count }}	{{ item.sf_count }}

Table 11 | Detected reciprocal soft clip events

Gene	Count
FLT3	{{ results.itd.flt3.table\|length }}
KMT2A	{{ results.itd.kmt2a.table\|length }}

Table 12 | Exon base count ratio over divisor gene

{% for item in results.expr %} {% endfor %}

Exon	Divisor gene	Ratio	Above threshold
{{ item.exon }}	{{ item.divisor_gene }}	{{ item.ratio\|show_float }}	{{ item.above_threshold }}

Results Overview