Table 8 | Base-level annotation statistics
| Metric | Count | % of aligned |
|---|---|---|
| Total aligned | {{ stats.aln.num_aligned_bases|show_int }} | 100% |
| Aligned to mRNA (CDS + UTR) | {{ (stats.rna.num_coding_bases + stats.rna.num_utr_bases)|show_int }} | {{ (stats.rna.num_coding_bases + stats.rna.num_utr_bases)|show_pct(stats.aln.num_aligned_bases) }} |
| Aligned to CDS | {{ stats.rna.num_coding_bases|show_int }} | {{ stats.rna.num_coding_bases|show_pct(stats.aln.num_aligned_bases) }} |
| Aligned to UTR | {{ stats.rna.num_utr_bases|show_int }} | {{ stats.rna.num_utr_bases|show_pct(stats.aln.num_aligned_bases) }} |
| Aligned to introns | {{ stats.rna.num_intronic_bases|show_int }} | {{ stats.rna.num_intronic_bases|show_pct(stats.aln.num_aligned_bases) }} |
| Aligned to intergenic regions | {{ stats.rna.num_intergenic_bases|show_int }} | {{ stats.rna.num_intergenic_bases|show_pct(stats.aln.num_aligned_bases) }} |
| Aligned to rRNA | {{ stats.rna.num_ribosomal_bases|show_int }} | {{ stats.rna.num_ribosomal_bases|show_pct(stats.aln.num_aligned_bases) }} |