BatchJobsParam |
Enable parallelization on batch systems |
BatchJobsParam-class |
Enable parallelization on batch systems |
batchtoolsCluster |
Enable parallelization on batch systems |
BatchtoolsParam |
Enable parallelization on batch systems |
BatchtoolsParam-class |
Enable parallelization on batch systems |
batchtoolsRegistryargs |
Enable parallelization on batch systems |
batchtoolsTemplate |
Enable parallelization on batch systems |
batchtoolsWorkers |
Enable parallelization on batch systems |
BiocParallel |
Bioconductor facilities for parallel evaluation |
BiocParallelParam |
BiocParallelParam objects |
BiocParallelParam-class |
BiocParallelParam objects |
bpaggregate |
Apply a function on subsets of data frames |
bpaggregate-method |
Apply a function on subsets of data frames |
bpbackend |
BiocParallelParam objects |
bpbackend-method |
Enable parallelization on batch systems |
bpbackend-method |
Enable parallelization on batch systems |
bpbackend-method |
BiocParallelParam objects |
bpbackend-method |
Enable parallel evaluation using registered dopar backend |
bpbackend-method |
Enable multi-core parallel evaluation |
bpbackend-method |
Enable serial evaluation |
bpbackend-method |
Enable simple network of workstations (SNOW)-style parallel evaluation |
bpbackend<- |
BiocParallelParam objects |
bpbackend<-,BatchJobsParam |
Enable parallelization on batch systems |
bpbackend<--method |
BiocParallelParam objects |
bpbackend<--method |
Enable parallel evaluation using registered dopar backend |
bpbackend<--method |
Enable simple network of workstations (SNOW)-style parallel evaluation |
bpexportglobals |
BiocParallelParam objects |
bpexportglobals-method |
BiocParallelParam objects |
bpexportglobals<- |
BiocParallelParam objects |
bpexportglobals<--method |
BiocParallelParam objects |
bpisup |
BiocParallelParam objects |
bpisup-method |
Enable parallelization on batch systems |
bpisup-method |
Enable parallelization on batch systems |
bpisup-method |
BiocParallelParam objects |
bpisup-method |
Enable parallel evaluation using registered dopar backend |
bpisup-method |
Enable multi-core parallel evaluation |
bpisup-method |
Enable serial evaluation |
bpisup-method |
Enable simple network of workstations (SNOW)-style parallel evaluation |
bpiterate |
Parallel iteration over an indeterminate number of data chunks |
bpiterate-method |
Parallel iteration over an indeterminate number of data chunks |
bpjobname |
BiocParallelParam objects |
bpjobname-method |
BiocParallelParam objects |
bpjobname<- |
BiocParallelParam objects |
bpjobname<--method |
BiocParallelParam objects |
bplapply |
Parallel lapply-like functionality |
bplapply-method |
Enable parallelization on batch systems |
bplapply-method |
Parallel lapply-like functionality |
bplog |
BiocParallelParam objects |
bplog-method |
BiocParallelParam objects |
bplog-method |
Enable serial evaluation |
bplog-method |
Enable simple network of workstations (SNOW)-style parallel evaluation |
bplog<- |
BiocParallelParam objects |
bplog<--method |
Enable serial evaluation |
bplog<--method |
Enable simple network of workstations (SNOW)-style parallel evaluation |
bplogdir |
BiocParallelParam objects |
bplogdir-method |
Enable parallelization on batch systems |
bplogdir-method |
BiocParallelParam objects |
bplogdir-method |
Enable serial evaluation |
bplogdir<- |
BiocParallelParam objects |
bplogdir<--method |
Enable parallelization on batch systems |
bplogdir<--method |
BiocParallelParam objects |
bplogdir<--method |
Enable serial evaluation |
bploop |
Internal Functions for SNOW-style Parallel Evaluation |
bploop.iterate |
Internal Functions for SNOW-style Parallel Evaluation |
bploop.lapply |
Internal Functions for SNOW-style Parallel Evaluation |
bpmapply |
Parallel mapply-like functionality |
bpmapply-method |
Parallel mapply-like functionality |
bpnworkers |
BiocParallelParam objects |
bpok |
Resume computation with partial results |
bpparam |
Maintain a global registry of available back-end Params |
bpprogressbar |
BiocParallelParam objects |
bpprogressbar-method |
BiocParallelParam objects |
bpprogressbar<- |
BiocParallelParam objects |
bpprogressbar<--method |
BiocParallelParam objects |
bpresultdir |
BiocParallelParam objects |
bpresultdir-method |
BiocParallelParam objects |
bpresultdir<- |
BiocParallelParam objects |
bpresultdir<--method |
BiocParallelParam objects |
bpRNGseed |
BiocParallelParam objects |
bpRNGseed-method |
Enable parallelization on batch systems |
bpRNGseed-method |
BiocParallelParam objects |
bpRNGseed<- |
BiocParallelParam objects |
bpRNGseed<--method |
Enable parallelization on batch systems |
bpRNGseed<--method |
BiocParallelParam objects |
bprunMPIslave |
Internal Functions for SNOW-style Parallel Evaluation |
bpschedule |
Schedule back-end Params |
bpschedule-method |
Enable parallelization on batch systems |
bpschedule-method |
Enable parallelization on batch systems |
bpschedule-method |
Enable multi-core parallel evaluation |
bpschedule-method |
Schedule back-end Params |
bpstart |
BiocParallelParam objects |
bpstart-method |
Enable parallelization on batch systems |
bpstart-method |
Enable parallelization on batch systems |
bpstart-method |
BiocParallelParam objects |
bpstart-method |
Enable parallel evaluation using registered dopar backend |
bpstart-method |
Enable multi-core parallel evaluation |
bpstart-method |
Enable serial evaluation |
bpstart-method |
Enable simple network of workstations (SNOW)-style parallel evaluation |
bpstop |
BiocParallelParam objects |
bpstop-method |
Enable parallelization on batch systems |
bpstop-method |
Enable parallelization on batch systems |
bpstop-method |
BiocParallelParam objects |
bpstop-method |
Enable parallel evaluation using registered dopar backend |
bpstop-method |
Enable multi-core parallel evaluation |
bpstop-method |
Enable serial evaluation |
bpstop-method |
Enable simple network of workstations (SNOW)-style parallel evaluation |
bpstopOnError |
BiocParallelParam objects |
bpstopOnError-method |
BiocParallelParam objects |
bpstopOnError<- |
BiocParallelParam objects |
bpstopOnError<--method |
BiocParallelParam objects |
bptasks |
BiocParallelParam objects |
bptasks-method |
BiocParallelParam objects |
bptasks<- |
BiocParallelParam objects |
bptasks<--method |
BiocParallelParam objects |
bpthreshold |
BiocParallelParam objects |
bpthreshold-method |
BiocParallelParam objects |
bpthreshold-method |
Enable simple network of workstations (SNOW)-style parallel evaluation |
bpthreshold<- |
BiocParallelParam objects |
bpthreshold<--method |
Enable serial evaluation |
bpthreshold<--method |
Enable simple network of workstations (SNOW)-style parallel evaluation |
bptimeout |
BiocParallelParam objects |
bptimeout-method |
BiocParallelParam objects |
bptimeout<- |
BiocParallelParam objects |
bptimeout<--method |
BiocParallelParam objects |
bptry |
Try expression evaluation, recovering from bperror signals |
bpvalidate |
Tools for developing functions for parallel execution in distributed memory |
bpvec |
Parallel, vectorized evaluation |
bpvec-method |
Parallel, vectorized evaluation |
bpvectorize |
Transform vectorized functions into parallelized, vectorized function |
bpvectorize-method |
Transform vectorized functions into parallelized, vectorized function |
bpworkers |
BiocParallelParam objects |
bpworkers-method |
Enable parallelization on batch systems |
bpworkers-method |
Enable parallelization on batch systems |
bpworkers-method |
BiocParallelParam objects |
bpworkers-method |
Enable parallel evaluation using registered dopar backend |
bpworkers-method |
Enable serial evaluation |
bpworkers-method |
Enable simple network of workstations (SNOW)-style parallel evaluation |
bpworkers<- |
BiocParallelParam objects |
bpworkers<--method |
Enable multi-core parallel evaluation |
bpworkers<--method |
Enable simple network of workstations (SNOW)-style parallel evaluation |