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| attributePages | Gives a summary of the attribute pages |
| biomartCacheClear | biomaRt result caching |
| biomartCacheInfo | biomaRt result caching |
| columns | Retrieve information from the BioMart databases |
| columns-method | Retrieve information from the BioMart databases |
| exportFASTA | Exports getSequence results to FASTA format |
| filterOptions | Displays the filter options |
| filterType | Displays the filter type |
| getBM | Retrieves information from the BioMart database |
| getBMlist | Retrieves information from the BioMart database |
| getGene | Retrieves gene annotation information given a vector of identifiers |
| getLDS | Retrieves information from two linked datasets |
| getSequence | Retrieves sequences |
| getXML | Retrieves information from the BioMart database using an XML query |
| keys | Retrieve information from the BioMart databases |
| keys-method | Retrieve information from the BioMart databases |
| keytypes | Retrieve information from the BioMart databases |
| keytypes-method | Retrieve information from the BioMart databases |
| listAttributes | lists the attributes available in the selected dataset |
| listDatasets | List or search the datasets available in the selected BioMart database |
| listEnsembl | lists the available BioMart databases hosted by Ensembl |
| listEnsemblArchives | Lists the available archived versions of Ensembl |
| listEnsemblGenomes | lists the available BioMart databases hosted by Ensembl |
| listFilters | List or search the filters available in the selected dataset |
| listFilterValues | List or search the options available for a specified filter. |
| listMarts | lists the available BioMart databases |
| Mart-class | Class Mart |
| NP2009code | Display the analysis code from the 2009 Nature protocols paper |
| searchAttributes | lists the attributes available in the selected dataset |
| searchDatasets | List or search the datasets available in the selected BioMart database |
| searchFilters | List or search the filters available in the selected dataset |
| searchFilterValues | List or search the options available for a specified filter. |
| select | Retrieve information from the BioMart databases |
| select-method | Retrieve information from the BioMart databases |
| select-methods | Retrieve information from the BioMart databases |
| show-method | Class Mart |
| useDataset | Select a dataset to use and updates Mart object |
| useEnsembl | Connects to the selected BioMart database and dataset hosted by Ensembl |
| useEnsemblGenomes | Connects to the selected BioMart database and dataset hosted by Ensembl |
| useMart | Connects to the selected BioMart database and dataset |