This functions are deprecated and will become defunct.
Performs the differential exon usage test in a single command
Accessor functions for DEXSeqDataSet details
Accessors for the 'counts' slot of a DEXSeqResults object.
Estimate the dispersions for a DEXSeqDataSet
Estimates exon usage coefficients from the fitted terms of the GLM.
Estimate the size factors for a DEXSeqDataSet
Methods from GRanges overlaps for the DEXSeq object
Subset and replacements of DEXSeqDataSet slots
Summarize per-exon p-values into per-gene q-values.
Visualization of the per gene DEXSeq results.