Index of /miniconda3/envs/bioinfo/bin

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]2to32020-08-20 00:59 129  
[ ]2to3-3.62020-08-20 00:59 129  
[TXT]FET.pl2019-10-26 16:51 3.1K 
[ ]Mozilla-CA.tar.gz2020-01-28 19:51 155K 
[ ]R2020-08-20 01:00 8.9K 
[ ]README2020-01-28 09:25 37K 
[ ]Rscript2020-08-20 01:00 20K 
[ ]_aaindexextract2020-07-09 23:46 20K 
[ ]_abiview2020-07-09 23:46 30K 
[ ]_acdc2020-07-09 23:46 19K 
[ ]_acdpretty2020-07-09 23:46 19K 
[ ]_acdtable2020-07-09 23:46 19K 
[ ]_acdtrace2020-07-09 23:46 19K 
[ ]_acdvalid2020-07-09 23:46 19K 
[ ]_antigenic2020-07-09 23:46 29K 
[ ]_backtranambig2020-07-09 23:46 20K 
[ ]_backtranseq2020-07-09 23:46 20K 
[ ]_banana2020-07-09 23:46 29K 
[ ]_bdftogd2019-11-19 19:11 3.9K 
[ ]_biosed2020-07-09 23:46 24K 
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[ ]_codcmp2020-07-09 23:46 20K 
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[ ]_coderet2020-07-09 23:46 25K 
[ ]_compseq2020-07-09 23:46 29K 
[ ]_cons2020-07-09 23:46 24K 
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[ ]_cpgreport2020-07-09 23:46 25K 
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[ ]_dbxgcg2020-07-09 23:46 36K 
[ ]_degapseq2020-07-09 23:46 20K 
[ ]_descseq2020-07-09 23:46 20K 
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[ ]_equicktandem2020-07-09 23:46 25K 
[ ]_est2genome2020-07-09 23:46 25K 
[ ]_etandem2020-07-09 23:46 25K 
[ ]_extractalign2020-07-09 23:46 20K 
[ ]_extractfeat2020-07-09 23:46 30K 
[ ]_extractseq2020-07-09 23:46 24K 
[ ]_findkm2020-07-09 23:46 25K 
[ ]_freak2020-07-09 23:46 25K 
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[ ]_garnier2020-07-09 23:46 42K 
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[ ]_gd2togif2019-11-19 19:12 20K 
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[ ]_gdlib-config2020-08-20 00:59 3.9K 
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[ ]_newseq2020-07-09 23:46 20K 
[ ]_noreturn2020-07-09 23:46 20K 
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[ ]_remap2020-07-09 23:46 39K 
[ ]_restover2020-07-09 23:46 29K 
[ ]_restrict2020-07-09 23:46 39K 
[ ]_revseq2020-07-09 23:46 20K 
[ ]_seealso2020-07-09 23:46 20K 
[ ]_seqmatchall2020-07-09 23:46 20K 
[ ]_seqret2020-07-09 23:46 20K 
[ ]_seqretsplit2020-07-09 23:46 20K 
[ ]_showalign2020-07-09 23:46 34K 
[ ]_showdb2020-07-09 23:46 45K 
[ ]_showfeat2020-07-09 23:46 34K 
[ ]_showorf2020-07-09 23:46 29K 
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[ ]_shuffleseq2020-07-09 23:46 20K 
[ ]_sigcleave2020-07-09 23:46 30K 
[ ]_silent2020-07-09 23:46 30K 
[ ]_sirna2020-07-09 23:46 30K 
[ ]_sixpack2020-07-09 23:46 25K 
[ ]_skipseq2020-07-09 23:46 20K 
[ ]_splitter2020-07-09 23:46 25K 
[ ]_stretcher2020-07-09 23:46 29K 
[ ]_stssearch2020-07-09 23:46 25K 
[ ]_supermatcher2020-07-09 23:46 25K 
[ ]_syco2020-07-09 23:46 25K 
[ ]_tcode2020-07-09 23:46 30K 
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[ ]_tfm2020-07-09 23:46 25K 
[ ]_tfscan2020-07-09 23:46 25K 
[ ]_tmap2020-07-09 23:46 38K 
[ ]_tranalign2020-07-09 23:46 25K 
[ ]_transeq2020-07-09 23:46 24K 
[ ]_trimest2020-07-09 23:46 24K 
[ ]_trimseq2020-07-09 23:46 20K 
[ ]_twofeat2020-07-09 23:46 30K 
[ ]_union2020-07-09 23:46 25K 
[ ]_vectorstrip2020-07-09 23:46 30K 
[ ]_water2020-07-09 23:46 25K 
[ ]_webpng2019-11-19 19:12 21K 
[ ]_whichdb2020-07-09 23:46 24K 
[ ]_wobble2020-07-09 23:46 25K 
[ ]_wordcount2020-07-09 23:46 20K 
[ ]_wordfinder2020-07-09 23:46 30K 
[ ]_wordmatch2020-07-09 23:46 25K 
[ ]_wossname2020-07-09 23:46 20K 
[ ]_xml2-config2020-08-20 00:59 2.0K 
[ ]_xmlcatalog2019-10-30 22:55 30K 
[ ]_xmllint2019-10-30 22:55 91K 
[ ]_yank2020-07-09 23:46 19K 
[TXT]a_sample_mt.sh2020-06-13 03:22 2.1K 
[ ]aaindexextract2020-07-09 23:45 221  
[ ]abi-dump2020-07-02 23:13 3.6M 
[ ]abi-dump.22020-07-02 23:13 3.6M 
[ ]abi-dump.2.10.82020-07-02 23:13 3.6M 
[ ]abiview2020-07-09 23:45 207  
[ ]acdc2020-07-09 23:45 201  
[ ]acdgalaxy2020-07-09 23:46 19K 
[ ]acdlog2020-07-09 23:46 19K 
[ ]acdpretty2020-07-09 23:45 211  
[ ]acdtable2020-07-09 23:45 209  
[ ]acdtrace2020-07-09 23:45 209  
[ ]acdvalid2020-07-09 23:45 209  
[ ]ace2sam2019-12-22 20:34 32K 
[ ]acountry2020-07-21 18:27 37K 
[TXT]addadapters.sh2020-06-13 03:22 2.6K 
[TXT]addssu.sh2020-06-13 03:22 2.2K 
[ ]adig2020-07-21 18:27 34K 
[TXT]adjusthomopolymers.sh2020-06-13 03:22 2.1K 
[ ]ahost2020-07-21 18:27 25K 
[ ]align-cache2020-07-02 23:13 8.9M 
[ ]align-cache.22020-07-02 23:13 8.9M 
[ ]align-cache.2.10.82020-07-02 23:13 8.9M 
[ ]align-info2020-07-02 23:13 3.4M 
[ ]align-info.22020-07-02 23:13 3.4M 
[ ]align-info.2.10.82020-07-02 23:13 3.4M 
[ ]aligncopy2020-07-09 23:46 20K 
[ ]aligncopypair2020-07-09 23:46 20K 
[TXT]alltoall.sh2020-06-13 03:22 2.0K 
[ ]amino-acid-composition2016-10-25 00:25 526  
[TXT]analyzeaccession.sh2020-06-13 03:22 1.4K 
[TXT]analyzegenes.sh2020-06-13 03:22 1.4K 
[TXT]analyzesketchresults.sh2020-06-13 03:22 2.2K 
[ ]annotate2019-11-19 19:12 20K 
[ ]annotateBed2019-12-17 22:18 41  
[ ]antigenic2020-07-09 23:45 211  
[TXT]applyvariants.sh2020-06-13 03:22 2.5K 
[ ]archive-pubmed2019-12-02 08:25 4.5K 
[ ]aserver2020-06-10 00:42 46K 
[ ]asp-cp2017-08-12 10:25 2.3K 
[ ]asp-ls2019-10-21 16:31 320  
[ ]assemblyget2020-07-09 23:46 20K 
[ ]autopoint2020-08-20 00:58 26K 
[DIR]aux/2020-08-20 00:59 -  
[ ]backtranambig2020-07-09 23:45 219  
[ ]backtranseq2020-07-09 23:45 215  
[ ]bam-load2020-07-02 23:13 9.1M 
[ ]bam-load.22020-07-02 23:13 9.1M 
[ ]bam-load.2.10.82020-07-02 23:13 9.1M 
[ ]bamToBed2019-12-17 22:18 41  
[ ]bamToFastq2019-12-17 22:18 43  
[ ]bamleftalign2020-08-20 00:59 24M 
[ ]bamtools2020-07-03 05:44 1.5M 
[ ]banana2020-07-09 23:45 205  
[TXT]bbcms.sh2020-06-13 03:22 6.2K 
[TXT]bbcountunique.sh2020-06-13 03:22 2.8K 
[TXT]bbduk.sh2020-06-13 03:22 19K 
[TXT]bbest.sh2020-06-13 03:22 1.4K 
[TXT]bbfakereads.sh2020-06-13 03:22 2.9K 
[TXT]bbmap.sh2020-06-13 03:22 20K 
[TXT]bbmapskimmer.sh2020-06-13 03:22 1.1K 
[TXT]bbmask.sh2020-06-13 03:22 4.4K 
[TXT]bbmerge-auto.sh2020-06-13 03:22 1.2K 
[TXT]bbmerge.sh2020-06-13 03:22 14K 
[TXT]bbnorm.sh2020-06-13 03:22 9.8K 
[TXT]bbrealign.sh2020-06-13 03:22 3.3K 
[TXT]bbrename.sh2020-06-13 03:22 396  
[TXT]bbsketch.sh2020-06-13 03:22 456  
[TXT]bbsplit.sh2020-06-13 03:22 5.9K 
[TXT]bbsplitpairs.sh2020-06-13 03:22 3.3K 
[TXT]bbstats.sh2020-06-13 03:22 392  
[TXT]bbversion.sh2020-06-13 03:22 517  
[TXT]bbwrap.sh2020-06-13 03:22 2.0K 
[ ]bcftools2020-08-20 00:59 1.0M 
[ ]bdftogd2019-11-19 19:11 3.9K 
[ ]bed12ToBed62019-12-17 22:18 44  
[ ]bedGraphToBigWig2020-07-10 23:58 705K 
[ ]bedToBam2019-12-17 22:18 41  
[ ]bedToIgv2019-12-17 22:18 36  
[ ]bedpeToBam2019-12-17 22:18 43  
[ ]bedtools2020-08-20 00:58 42M 
[ ]between-two-genes2016-10-25 00:25 88  
[ ]bgzip2020-08-20 00:59 616K 
[ ]bioawk2020-08-20 00:58 411K 
[ ]biosed2020-07-09 23:45 205  
[TXT]blast2sam.pl2018-06-15 15:03 5.3K 
[ ]blast_formatter2020-07-26 07:30 239K 
[ ]blastdb_aliastool2020-07-26 07:30 122K 
[ ]blastdbcheck2020-07-26 07:30 146K 
[ ]blastdbcmd2020-07-26 07:30 146K 
[ ]blastn2020-07-26 07:30 199K 
[ ]blastp2020-07-26 07:30 199K 
[ ]blastx2020-07-26 07:30 199K 
[TXT]bloomfilter.sh2020-06-13 03:22 3.7K 
[ ]bowtie22020-07-26 02:16 21K 
[ ]bowtie2-align-l2020-08-20 00:59 13M 
[ ]bowtie2-align-s2020-08-20 00:59 13M 
[ ]bowtie2-build2020-07-26 02:16 2.9K 
[ ]bowtie2-build-l2020-08-20 00:59 3.9M 
[ ]bowtie2-build-s2020-08-20 00:59 4.0M 
[ ]bowtie2-inspect2020-07-26 02:16 2.7K 
[ ]bowtie2-inspect-l2020-08-20 00:59 2.2M 
[ ]bowtie2-inspect-s2020-08-20 00:59 2.2M 
[TXT]bowtie2sam.pl2014-08-18 21:29 3.3K 
[TXT]bt-context.txt2019-02-22 01:50 3.2K 
[ ]bt-link2019-12-03 00:25 7.2K 
[ ]bt-load2019-04-04 21:25 2.3K 
[ ]bt-save2019-04-04 21:25 2.0K 
[ ]bt-srch2019-11-11 20:25 4.2K 
[ ]btwisted2020-07-09 23:45 209  
[TXT]build_env_setup.sh2020-08-20 00:59 8.9K 
[ ]bunzip22019-12-07 21:32 327K 
[ ]bwa2020-08-20 00:58 1.3M 
[ ]bzcat2019-12-07 21:32 327K 
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[ ]c892020-08-01 10:26 225  
[ ]c992020-08-01 10:26 216  
[ ]c_rehash2020-08-20 00:53 6.1K 
[ ]cache-mgr2020-07-02 23:13 3.4M 
[ ]cache-mgr.22020-07-02 23:13 3.4M 
[ ]cache-mgr.2.10.82020-07-02 23:13 3.4M 
[ ]cachedas2020-07-09 23:46 25K 
[ ]cachedbfetch2020-07-09 23:46 35K 
[ ]cacheebeyesearch2020-07-09 23:46 20K 
[ ]cacheensembl2020-07-09 23:46 25K 
[ ]cai2020-07-09 23:45 199  
[ ]cairo-trace2020-08-20 00:59 3.0K 
[TXT]calcmem.sh2020-06-13 03:22 5.6K 
[TXT]calctruequality.sh2020-06-13 03:22 5.6K 
[TXT]callgenes.sh2020-06-13 03:22 2.3K 
[TXT]callpeaks.sh2020-06-13 03:22 2.3K 
[TXT]callvariants.sh2020-06-13 03:22 8.9K 
[TXT]callvariants2.sh2020-06-13 03:22 1.4K 
[ ]captoinfo2018-12-11 15:45 86K 
[ ]cd-hit2019-10-26 16:51 175K 
[ ]cd-hit-2d2019-10-26 16:51 175K 
[TXT]cd-hit-2d-para.pl2019-10-26 16:51 12K 
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[TXT]cd-hit-clstr_2_blm8.pl2019-10-26 16:51 2.1K 
[ ]cd-hit-div2019-10-26 16:51 175K 
[TXT]cd-hit-div.pl2019-10-26 16:51 877  
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[ ]cd-hit-est-2d2019-10-26 16:51 175K 
[TXT]cd-hit-para.pl2019-10-26 16:51 12K 
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[ ]cg-load.22020-07-02 23:13 3.8M 
[ ]cg-load.2.10.82020-07-02 23:13 3.8M 
[ ]chaos2020-07-09 23:45 203  
[ ]chardetect2020-08-20 01:00 258  
[ ]charge2020-07-09 23:45 205  
[ ]checktrans2020-07-09 23:45 213  
[ ]chips2020-07-09 23:45 203  
[ ]cirdna2020-07-09 23:45 205  
[ ]cjpeg2020-06-01 16:24 51K 
[TXT]cleanup-blastdb-volumes.py2020-07-26 07:30 6.1K 
[ ]clear2018-12-11 15:45 14K 
[ ]closestBed2019-12-17 22:18 40  
[TXT]clstr2tree.pl2019-10-26 16:51 952  
[TXT]clstr2txt.pl2019-10-26 16:51 1.2K 
[TXT]clstr2xml.pl2019-10-26 16:51 4.4K 
[TXT]clstr_cut.pl2019-10-26 16:51 464  
[TXT]clstr_list.pl2019-10-26 16:51 3.2K 
[TXT]clstr_list_sort.pl2019-10-26 16:51 1.1K 
[TXT]clstr_merge.pl2019-10-26 16:51 3.1K 
[TXT]clstr_merge_noorder.pl2019-10-26 16:51 2.1K 
[TXT]clstr_quality_eval.pl2019-10-26 16:51 3.4K 
[TXT]clstr_quality_eval_by_link.pl2019-10-26 16:51 2.3K 
[TXT]clstr_reduce.pl2019-10-26 16:51 1.0K 
[TXT]clstr_renumber.pl2019-10-26 16:51 196  
[TXT]clstr_rep.pl2019-10-26 16:51 554  
[TXT]clstr_reps_faa_rev.pl2019-10-26 16:51 1.1K 
[TXT]clstr_rev.pl2019-10-26 16:51 1.6K 
[TXT]clstr_select.pl2019-10-26 16:51 387  
[TXT]clstr_select_rep.pl2019-10-26 16:51 555  
[TXT]clstr_size_histogram.pl2019-10-26 16:51 779  
[TXT]clstr_size_stat.pl2019-10-26 16:51 725  
[TXT]clstr_sort_by.pl2019-10-26 16:51 806  
[TXT]clstr_sort_prot_by.pl2019-10-26 16:51 1.3K 
[TXT]clstr_sql_tbl.pl2019-10-26 16:51 2.9K 
[TXT]clstr_sql_tbl_sort.pl2019-10-26 16:51 1.1K 
[TXT]clumpify.sh2020-06-13 03:22 11K 
[ ]clusterBed2019-12-17 22:18 40  
[ ]codcmp2020-07-09 23:45 205  
[ ]codcopy2020-07-09 23:45 207  
[ ]coderet2020-07-09 23:45 207  
[TXT]color-chrs.pl2017-04-07 11:52 17K 
[ ]coloredlogs2020-08-20 01:00 251  
[TXT]commonkmers.sh2020-06-13 03:22 1.8K 
[TXT]comparegff.sh2020-06-13 03:22 1.1K 
[TXT]comparesketch.sh2020-06-13 03:22 15K 
[TXT]comparessu.sh2020-06-13 03:22 2.5K 
[TXT]comparevcf.sh2020-06-13 03:22 2.2K 
[ ]compile_et2020-08-20 00:59 852  
[ ]complementBed2019-12-17 22:18 43  
[ ]compseq2020-07-09 23:45 207  
[TXT]conda_build.sh2020-06-13 03:22 379  
[ ]cons2020-07-09 23:45 201  
[ ]consambig2020-07-09 23:46 20K 
[TXT]consect.sh2020-06-13 03:22 1.9K 
[TXT]consensus.sh2020-06-13 03:22 3.3K 
[ ]convert2blastmask2020-07-26 07:30 74K 
[ ]corelist2020-08-20 00:58 13K 
[TXT]countbarcodes.sh2020-06-13 03:22 2.3K 
[TXT]countgc.sh2020-06-13 03:22 1.2K 
[TXT]countsharedlines.sh2020-06-13 03:22 2.1K 
[ ]coverageBed2019-12-17 22:18 41  
[TXT]coverage_to_regions.py2020-07-10 01:03 1.5K 
[ ]cpan2020-08-20 00:58 8.0K 
[ ]cpanm2020-08-20 00:59 296K 
[ ]cpgplot2020-07-09 23:45 207  
[ ]cpgreport2020-07-09 23:45 211  
[TXT]crossblock.sh2020-06-13 03:22 147  
[TXT]crosscontaminate.sh2020-06-13 03:22 2.9K 
[ ]curl2020-08-17 23:14 246K 
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[ ]cusp2020-07-09 23:45 201  
[ ]cutadapt2020-08-20 00:59 282  
[ ]cutgextract2020-07-09 23:45 215  
[TXT]cutgff.sh2020-06-13 03:22 2.9K 
[TXT]cutprimers.sh2020-06-13 03:22 2.0K 
[ ]cutseq2020-07-09 23:45 205  
[ ]cwebp2020-01-06 03:51 71K 
[ ]dan2020-07-09 23:45 199  
[ ]datamash2020-08-20 00:58 154K 
[ ]datatool2020-07-26 07:30 1.4M 
[ ]dbiblast2020-07-09 23:45 209  
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